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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816565.1_cds_XP_016498853.1_12834
CDS Infomation

[gene=LOC107817518] [db_xref=GeneID:107817518] [protein=protein phosphatase 2C 70-like] [protein_id=XP_016498853.1] [location=complement(join(244..405,510..564,870..999,1120..1235,2608..2702,3002..3137,3481..3542,3679..3822,6101..6259,6390..6565,6668..6865,6939..7128,10565..10774))] [gbkey=CDS]
Sequence

ATGCCAGGTGCTGATGATACCATGAACATGACCACTCTTAGCAGCAGCAACATTGTCTTA
TCGAAAGAGGGCATTTTTATTGTTATTATTGTTATGCTCCTTTTGATCCTCTTATTTATC
CTTATCGCCTGCAAGTATAAGCCATGGCGTTTCTTTTACTCTTCTCCTGTCTCCTCCAAC
TCCGTCTTTCGCAACAAGAACATCATCAAGGCTGATGATGTAGAGAGGCCTCTTATTTCA
GATGATTTGCATCTTATTGAAAGCCAGAGTCATGAATATTCTAGAAGTTATGCTCACGAT
GCAGGCGGTCACCAGAATCAAGGGGCTTATGGTTCACCCTGGACTCAGGGACTTGTTCAT
AAACAAAGGCTGACCTCCATAAATCCTCAATTAATGCATAGCGACAGTTTTGTTCTGGAT
GTTTGTGATACTTCAGAAGATATTTCTATTGGCCAGACGCTTAAGCGTCCATTTGTGATT
AATCAGTTAGCAGAAGAGCAGAAACACATAAGATCGGAAGATGTAAAGTACAGACCAAAT
GTGGCAATACAGAATGAAAAGTTTGGAGATTTTGCTCCAAAAGATACTAAAGATCAAAGA
AGCATCCTCATGCTGGAGGTTATCTCGGGACCTTGTCAAGGTCTTCAACATTCAATGCAA
TCAACAAATACATCTAGGCTTCCACTTACTCTTGGAAGAGTGACACCTAGTGATATCTTG
CTCAAGGATTCAGAAATTTCTGGCAAGCATGCAATGATAAACTGGAATATAAATAAATTG
AGGTGGGAGCTCGTTGATATGGGTAGCTTGAACGGCACACTAGTTAATTCCCGTGCTGTC
CATAGTCCTCATTCTGGGAGCAGACAGTGGGGCGATCCAGTTGAGCTTGCAAATGGAGAC
ATAATAACGCTTGGCACAACTTCGCAAATATTTGTACAAATTAGATCCCAAAGTGAGCAT
CAGGTCCCATTTGGGATTGGTGTCGCATCAGATGCCATGGCCGTACGTCGAGGAGGAAAG
AAGCTGCCTATGGAAGATGTTTGTTATTACCATTGGCCTGTTCCCGGGACGGATAAGTTT
GGATTGTTTGGGATATGCGATGGACACGGAGGAGCTGGTGCTGCAACGTCTGTCAGCAAA
ATAATGCCTCAGATAGTTGCTAGCATCTTGTCAGATTCATTTAGAAGGGAGAGGGTGTTG
TCACAATGTGATGCTTCAGATGTTCTTAGAGAAGCATTCTCTCAAACTGAAGCGAGTATA
GATCACCACTATGAGGGATGTACTGCAACAGTGCTTCTGGTTTGGGCTGATGATCATGAA
AACTTTTATGCGCAATGTGCAAATGTTGGAGATTCAGCTTGTGTTGTAAATATTGACGGG
AAGCTGACAAAAATGACTGAAGATCACAGAATAACTAGTTACTCTGAAAGGATGCGTATC
CAAGCAACAGGGGATCCTTTAAAAGATGGGGAAACAAGACTATGTGGTTTAAACCTTGCT
CGTATGCTCGGAGACAAATTTCTTAAACAGCAAGATGCTCGCTTCAGTTCAGAACCTTAT
ATTAGTCAAGTTGTGTACATACATCAAGCTAGCAAAGGATTTGCACTGTTAGCTAGTGAT
GGCTTCTGGGACGTAATTAATGTGAAGAAGGCAGTTCAACAAGTCCAGCAGACAAAGGAG
AGAAGCTCAACAGATGAAGAAATTTCTGCAGAAAAAATAGCAAATTCTTTGTTGAACGAA
GCCAGAACATTGCGCACAAAAGATAACACTTCCATAATTTTCTTAGATTTTGACACCACC
AATAGAATTCTTTCTTGTAAAATTGATTCATAG

Peptide Sequence

PEP ID

XP_016498853.1
PEP Infomation

PREDICTED: protein phosphatase 2C 70-like [Nicotiana tabacum]
Sequence

MPGADDTMNMTTLSSSNIVLSKEGIFIVIIVMLLLILLFILIACKYKPWRFFYSSPVSSN
SVFRNKNIIKADDVERPLISDDLHLIESQSHEYSRSYAHDAGGHQNQGAYGSPWTQGLVH
KQRLTSINPQLMHSDSFVLDVCDTSEDISIGQTLKRPFVINQLAEEQKHIRSEDVKYRPN
VAIQNEKFGDFAPKDTKDQRSILMLEVISGPCQGLQHSMQSTNTSRLPLTLGRVTPSDIL
LKDSEISGKHAMINWNINKLRWELVDMGSLNGTLVNSRAVHSPHSGSRQWGDPVELANGD
IITLGTTSQIFVQIRSQSEHQVPFGIGVASDAMAVRRGGKKLPMEDVCYYHWPVPGTDKF
GLFGICDGHGGAGAATSVSKIMPQIVASILSDSFRRERVLSQCDASDVLREAFSQTEASI
DHHYEGCTATVLLVWADDHENFYAQCANVGDSACVVNIDGKLTKMTEDHRITSYSERMRI
QATGDPLKDGETRLCGLNLARMLGDKFLKQQDARFSSEPYISQVVYIHQASKGFALLASD
GFWDVINVKKAVQQVQQTKERSSTDEEISAEKIANSLLNEARTLRTKDNTSIIFLDFDTT
NRILSCKIDS

Transcript Sequence

Gene sequence data has not been registered.